BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G12LP1|AL428791
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1059 1538 0.0
>3x_Contig1059
Length = 3822
Score = 1538 bits (769), Expect = 0.0
Identities = 797/811 (98%), Gaps = 1/811 (0%)
Strand = Plus / Plus
Query: 2 agattcaaccaagggcattttgataaccttattttcgagaataccaatcaatggagatgg 61
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2049 agattcaaccaagggcattctgataaccttattttcgagaataccaatcaatggagatgg 2108
Query: 62 agwwwctggagtcatgttcaggatggccttgacagcatcaacaccttgcaaagtagctaa 121
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2109 agtctctggagtcatgttcaggatggccttgacagcatcaacaccttgcaaagtagctaa 2168
Query: 122 ccatctatcatgtgccacagctgtaccacctctttgaacgtgtcccaatgtagtgatttt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2169 ccatctatcatgtgccacagctgtaccacctctttgaacgtgtcccaatgtagtgatttt 2228
Query: 182 ggtgtctaarccaagttctaccaagacatccttaacttgttcggcggtaattgggtttaa 241
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2229 ggtgtctaaaccaagttctaccaagacatccttaacttgttcggcggtaattgggtttaa 2288
Query: 242 ttgatcatccaatgcaccttctgcaacgataactgtgttatttctacgacccttttctct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2289 ttgatcatccaatgcaccttctgcaacgataactgtgttatttctacgacccttttctct 2348
Query: 302 atgcctttgacaaacacgtttcaactcatcttgccatttgccgtgaggagctgctctctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2349 atgcctttgacaaacacgtttcaactcatcttgccatttgccgtgaggagctgctctctc 2408
Query: 362 tggratgaraatgtaatcagccgcggtag-gataccagacattagacctaaccaaccaca 420
||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2409 tggaatgaaaatgtaatcagccgcggtagcgataccagacattagacctaaccaaccaca 2468
Query: 421 atgcctacccatcacttccacaacaaatgctcttgaatgtgacttagcagtagcgtcgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 atgcctacccatcacttccacaacaaatgctcttgaatgtgacttagcagtagcgtcgat 2528
Query: 481 gtaatcaaccatctcacagattctttccaaagcagagtaagcrccaatggtagartcagt 540
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 2529 gtaatcaaccatctcacagattctttccaaagcagagtaagcaccaatggtagaatcagt 2588
Query: 541 accagacatatcgttatcgatggagccgaccataccaacaatggttaagttttggtatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 accagacatatcgttatcgatggagccgaccataccaacaatggttaagttttggtatag 2648
Query: 601 agcaacttcgtcctcagtaaacttaccgtccttcactagttcttctactagagatggtca 660
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 2649 agcaacttcgtcctcagtaaacttaccgtccttcactagttcttcaactagagatggcca 2708
Query: 661 ttcggatctgaacaagtctgcaccagttagtgaaccgtcaccaccaattacaaccaaagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 ttcggatctgaacaagtctgcaccagttagtgaaccgtcaccaccaattacaaccaaagc 2768
Query: 721 gtcgataccttgatctwtcaaattagaacaagcttgcttacggccccatctttctctgaw 780
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2769 gtcgataccttgatctatcaaattagaacaagcttgcttacggccccatctttctctgaa 2828
Query: 781 ctccttggaacgagcggtaccaattaatgta 811
|||||||||||||||||||||||||||||||
Sbjct: 2829 ctccttggaacgagcggtaccaattaatgta 2859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4252
Number of Sequences: 1807
Number of extensions: 4252
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)